You are currently browsing the tag archive for the ‘Adami’ tag.

Figure – Understanding the Brain as a Computational Network: significant neuronal motifs of size 3.  Most over-represented colored motifs of size 3 in the C. elegans complex neuronal network. Green: sensory neuron; blue: motor neuron; red: interneuron. Arrows represent direction that the signal travels between the two cells. (from Adami et al. 2011 [Ref. below])

Abstract: […] Complex networks can often be decomposed into less complex sub-networks whose structures can give hints about the functional organization of the network as a whole. However, these structural motifs can only tell one part of the functional story because in this analysis each node and edge is treated on an equal footing. In real networks, two motifs that are topologically identical but whose nodes perform very different functions will play very different roles in the network. Here, we combine structural information derived from the topology of the neuronal network of the nematode C. elegans with information about the biological function of these nodes, thus coloring nodes by function. We discover that particular colorations of motifs are significantly more abundant in the worm brain than expected by chance, and have particular computational functions that emphasize the feed-forward structure of information processing in the network, while evading feedback loops. Interneurons are strongly over-represented among the common motifs, supporting the notion that these motifs process and transduce the information from the sensor neurons towards the muscles. Some of the most common motifs identified in the search for significant colored motifs play a crucial role in the system of neurons controlling the worm’s locomotion. The analysis of complex networks in terms of colored motifs combines two independent data sets to generate insight about these networks that cannot be obtained with either data set alone. The method is general and should allow a decomposition of any complex networks into its functional (rather than topological) motifs as long as both wiring and functional information is available. […] from Qian J, Hintze A, Adami C (2011) Colored Motifs Reveal Computational Building Blocks in the C. elegans Brain, PLoS ONE 6(3): e17013. doi:10.1371/journal.pone.0017013

[…] The role of evolution in producing these patterns is clear, said Adami. “Selection favors those motifs that impart high fitness to the organism, and suppresses those that work against the task at hand.” In this way, the efficient and highly functional motifs (such as the sensory neuron-interneuron-motor neuron motif) are very common in the nervous system, while those that would waste energy and give no benefit to, or even harm, the animal are not found in the network. “Adami and his team have used evolutionary computation to develop hypotheses about the evolution of neural circuits and find, for these nematode worms, that simplicity is the rule,” says George Gilchrist, program director in NSF’s Division of Environmental Biology (in the Directorate for Biological Sciences), which funds BEACON. “By including functional information about each node in the circuit, they have begun decoding the role of natural selection in shaping the architecture of neural circuits.” […] from Danielle J. Whittaker “Understanding the Brain as a Computational Network“, NSF, April 2011.

[...] People should learn how to play Lego with their minds. Concepts are building bricks [...] V. Ramos, 2002.

@ViRAms on Twitter


Blog Stats

  • 244,564 hits